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Research Vision

The overarching research theme of Pallavi Singh Lab focuses on understanding and enhancing photosynthesis and plant productivity. Rising global food demand, coupled with shrinking freshwater resources and more frequent droughts, poses a critical challenge to agriculture and food security. To address this, we investigate plant water use efficiency (WUE), the amount of biomass produced per unit of water consumed, with the aim of developing more water-efficient crops and advancing climate-smart agriculture. Our research integrates a powerful toolkit of functional genomics and synthetic biology, including grafting, single-cell sequencing, epidermal cell enrichment, and precise genome editing. By integrating these tools, we aim to uncover fundamental biological mechanisms and translate them into tangible strategies for breeding or engineering crops that thrive under future climate scenarios. 

Research Projects

Our research projects are focused on addressing some of the most urgent challenges in plant science. In addition to our core work at the School of Life Sciences, University of Essex, we collaborate extensively with international partners, including International Rice Research Institute (Philippines), IRD (France), IRRI South Asia Regional Centre (India), and the Max Plank Institute of Molecular Plant Physiology (Germany). 

Our projects are structured around key research themes, combining curiosity-driven discovery with solutions for climate resilience and sustainable agriculture. If you are interested in joining our team or undertaking a BSc or MSc research project, please contact the Head of the Group: pallavi.singh@essex.ac.uk

Cereal grafting:

A research tool to understand plant physiology and root-shoot communication 

Although water use efficiency within a species can vary, the greatest differences are found across species, for example crops like sorghum and millets have higher water use efficiency compared with the global staples like rice and wheat. This project will harness the great potential that the field of monocot grafting entails for crop improvement. Interspecific-cereal grafts will be generated to understand water use strategies that will in turn enable sustained food production.  

Research Team: Crispus Mbaluto, Xabier Simón, Mouesanao Kandjoze, and Anoop Tripathi (collaborator). 

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Improving water use efficiency in rice: 

For this we are employing a multi-pronged approach: (1) developing “water-smart grafts” by combining water-efficient root systems from African and wild rice with elite rice landraces, allowing for in-depth exploration of root-to-shoot signalling and the identification of key genetic determinants of WUE, and (2) leveraging natural variation in WUE across diverse rice accessions to map the genetic and physiological traits linked to improved water use. Moreover, through advanced phenotyping, gene expression profiling, and CRISPR/Cas9-based tissue-specific gene editing, we aim to engineer high-WUE rice lines.  

Research Team: Crispus Mbaluto, Xabier Simón, and Mouesanao Kandjoze. 

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Understanding higher water use efficiency of C4 plants: 

Water use efficiency is a complex trait, governed by different factors, like leaf-anatomy, leaf hydraulics, carboxylation capacity, spatial patterning of stomata, co-ordination of subsidiary cells, underlying mesophyll airspaces and CO2 diffusion etc. This project uses a wide array of functional genomic and synthetic biology techniques to understand the different parameters resulting in high water use efficiency in C4 plants. Gynandropsis gynandra and Amaranthus sp. will be used as dicots while Millets and Sorghum will be used as monocot systems to understand water use efficiency traits.  

Research Team: Xabier Simón, and Mouesanao Kandjoze

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Dissecting aquaporin regulation to enhance water use efficiency and photosynthetic performance: 

We aim to unravel the dynamic regulation of aquaporins, the membrane water channels that are essential for controlling plant water transport and maintaining cellular homeostasis under fluctuating environmental conditions. By integrating high-resolution phenotyping, gene expression profiling, and cell-specific functional analyses, we seek to understand how aquaporins coordinate water fluxes across tissues and influence photosynthetic efficiency and WUE in crops. Focusing on naturally occurring allelic variation and stress-responsive regulatory mechanisms, we will identify key aquaporin isoforms and their upstream regulators that confer resilience under drought and variable water availability. Ultimately, this project will inform targeted genetic or biotechnological interventions to optimise aquaporin function, advancing the development of climate-smart crops that use water more efficiently without compromising productivity. 

Research Team: Xabier Simón, Mouesanao Kandjoze, and Ella Whiteley 

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Engineering graft interfaces for cross-species compatibility and organelle transfer: 

This project pioneers a synthetic biology-enabled strategy to overcome the challenges in dicot–monocot grafting, creating innovative pathways for crop improvement. Our goal is to understand and refine the developmental plasticity required for successful graft union formation, enabling both vascular and functional integration. In addition, we will explore the groundbreaking possibility of horizontal chloroplast transfer from dicots to monocots via grafting. By using fluorescently labelled chloroplasts and vascular tracers, we aim to track plastid movement and assess the transient functionality of organelles across graft interfaces. Together, this multi-pronged approach will expand the toolkit for interspecies grafting, unlock new potential in plant bioengineering, and redefine the boundaries of genetic exchange and physiological compatibility in plants. 

Research Team: Pallavi Singh, (Come join us! We are looking for PDRA, Research Assistant and PhD student). 

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Maximising technological innovation to unlock the unconventional biological potential of mistletoe: 

We are embarking on a novel research direction using European mistletoe (Viscum album), a hemiparasite with unique biological capabilities. Mistletoe forms vascular connections with unrelated host species, bypassing reproductive and genetic compatibility barriers. We explore this natural grafting ability to uncover new strategies for engineering cross-species grafts, with potential to overcome long-standing limitations in crop hybridisation and rootstock-scion innovation. As a hemiparasite, mistletoe also provides a living system to study how water and carbon are partitioned between two genetically distinct organisms, offering powerful insights into water use efficiency and resource allocation. Beyond biology, the sticky mistletoe berry presents a sustainable blueprint for bio-adhesive development. Partnering with mistletoe farmer Dr Henry Webber, our work merges fundamental research with commercial potential from climate-resilient crops to eco-friendly materials, reimagining what a parasite can teach us about plant resilience and innovation. 

Research Team: Dr Nick Aldred and Urvi Gandhi 

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Identifying guard cell specific promoters in cereals: 

Our present understanding of water use is limited and particularly biased by study of certain dicot species like Arabidopsis, tomato and soybean. There is an obvious gap in our understanding of traits underpinning water use, particularly in rice and wheat. This research project will address the following overarching question; can the targeted manipulation of the guard cell in cereal crops like rice and wheat lead to changes in water use efficiency? For guard cell-specific manipulation, the project will employ a wide range of complementary techniques such as single-cell sequencing, epidermal cell enrichment, RNA-sequencing, and genome editing.  

Research Team: Crispus Mbaluto and Ella Whiteley 

Grants

Current Grants

UKRI-Future Leaders Fellowship (November 2024 - October 2028) 

https://www.ukri.org/news/68-new-future-leaders-fellows-awarded-104-million-in-the-eighth-round/

https://www.essex.ac.uk/news/2024/07/18/dr-pallavi-singh-receives-ukri-fellowship

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British Council - International Science Partnership Funds with Philippines (August 2024 - July 2026) 

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BBSRC IAA Commercial Accelerator Funds (August 2024 - December 2024) 

 

BBSRC - Protected and Controlled Environment PACE (Lawson, Simkin and Singh; June 2024 - May 2027) 

Undergraduate Summer Studentships

Gatsby Summer Studentship (Summer 2024) 

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Rank Prize Summer Studentship (Summer 2024) 

Awards

Plants that we study

Rice (Oryza species)

Rice serves as a global staple crop for more than 3.5 billion people. It is grown in more than 100 countries and provides nearly half of the global calories. Rice is vital for food security, especially in South Asia, where it supplies a substantial portion of the caloric and protein intake. Moreover, the demand for rice in Africa is growing at more than 6% per year (Source: AfricaRice). Research on rice is crucial for addressing many of the world's most pressing challenges, from ensuring food security and economic development to promoting environmental sustainability, and advancing scientific knowledge.

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Millets and Sorghum

C4 grasses like Millets, Sorghum and Setaria species have great drought tolerance traits and their vast germplasm collection, present ample opportunities for exploring the domestication process and discovering new allelic variation. These characteristics collectively indicate that these grasses are exceptionally well-suited for investigating water use traits, and serving as C4 monocotyledonous models.

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Gynandropsis gynandra

Gynandropsis gynandra is a green-leafy, dicotyledonous, vegetable plant with both nutritional and medicinal value. It is a member of Cleomaceae, sister clade to the Brassicaceae. Owing to its close evolutionary relationship with C3 Arabidopsis thaliana, it has also been employed as a model plant to understand the evolution and regulation of C4 photosynthesis.

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